P43405

Background

Protein Name
Tyrosine-protein kinase SYK
Gene Name
SYK
Organism
Homo sapiens

Annotations

Function
Non-receptor tyrosine kinase which mediates signal transduction downstream of a variety of transmembrane receptors including classical immunoreceptors like the B-cell receptor (BCR). Regulates several biological processes including innate and adaptive immunity, cell adhesion, osteoclast maturation, platelet activation and vascular development. Assembles into signaling complexes with activated receptors at the plasma membrane via interaction between its SH2 domains and the receptor tyrosine-phosphorylated ITAM domains. The association with the receptor can also be indirect and mediated by adapter proteins containing ITAM or partial hemITAM domains. The phosphorylation of the ITAM domains is generally mediated by SRC subfamily kinases upon engagement of the receptor. More rarely signal transduction via SYK could be ITAM-independent. Direct downstream effectors phosphorylated by SYK include VAV1, PLCG1, PI-3-kinase, LCP2 and BLNK. Initially identified as essential in B-cell receptor (BCR) signaling, it is necessary for the maturation of B-cells most probably at the pro-B to pre-B transition. Activated upon BCR engagement, it phosphorylates and activates BLNK an adapter linking the activated BCR to downstream signaling adapters and effectors. It also phosphorylates and activates PLCG1 and the PKC signaling pathway. It also phosphorylates BTK and regulates its activity in B-cell antigen receptor (BCR)-coupled signaling. In addition to its function downstream of BCR plays also a role in T-cell receptor signaling. Plays also a crucial role in the innate immune response to fungal, bacterial and viral pathogens. It is for instance activated by the membrane lectin CLEC7A. Upon stimulation by fungal proteins, CLEC7A together with SYK activates immune cells inducing the production of ROS. Also activates the inflammasome and NF-kappa-B-mediated transcription of chemokines and cytokines in presence of pathogens. Regulates neutrophil degranulation and phagocytosis through activation of the MAPK signaling cascade. Also mediates the activation of dendritic cells by cell necrosis stimuli. Also involved in mast cells activation. Also functions downstream of receptors mediating cell adhesion. Relays for instance, integrin-mediated neutrophils and macrophages activation and P-selectin receptor/SELPG-mediated recruitment of leukocytes to inflammatory loci. Plays also a role in non-immune processes. It is for instance involved in vascular development where it may regulate blood and lymphatic vascular separation. It is also required for osteoclast development and function. Functions in the activation of platelets by collagen, mediating PLCG2 phosphorylation and activation. May be coupled to the collagen receptor by the ITAM domain-containing FCER1G. Also activated by the membrane lectin CLEC1B that is required for activation of platelets by PDPN/podoplanin. Involved in platelet adhesion being activated by ITGB3 engaged by fibrinogen.

Mapping Statistics

Site Maximum Consensus Site Population Minimum Consensus Site Population Median Consensus Site Population
MPP 22 1 11.0
AAS 17 2 9.5
MT3 20 2 10.0
LBP 9 2 3.0
ATP 21 1 10.0
DEF 13 3 9.0
DFG 17 1 8.0
CMP 9 9 9.0
EDI 12 2 7.0
DRS 3 2 3.0
PDIG 15 2 4.0

Mapping Results

PDB ID Maximum Consensus Site Population
MPP site AAS site MT3 site LBP site ATP site DEF site DFG site CMP site PMP site EDI site DRS site PDIG site PIF site
Total Druggable Structures per Site 16 1 3 0 19 0 3 0 0 0 0 0 0
3TUD 11 0 20 0 12 0 14 0 0 9 0 6 0
4XG9 15 17 0 0 10 0 15 0 0 2 0 8 0
4PV0 16 0 0 7 11 0 7 0 0 0 0 2 0
4WNM 12 0 0 4 11 0 10 0 0 0 0 2 0
4FL2 20 0 18 0 12 0 0 0 0 6 0 2 0
4YJS 14 0 0 2 16 0 0 0 0 7 0 2 0
4FYN 17 0 14 2 5 0 8 0 0 10 2 2 0
4XG6 15 0 0 0 6 0 12 0 0 2 0 4 0
4YJU 13 0 0 0 16 0 3 0 0 8 0 0 0
4YJO 13 0 0 0 16 0 2 0 0 12 0 2 0
4PX6 0 0 0 0 17 0 13 0 0 10 0 2 0
4DFN 10 0 0 9 13 0 0 0 0 9 0 3 0
4FL1 15 0 0 0 0 0 9 0 0 0 3 2 0
1XBB 16 0 0 4 12 0 5 0 0 0 2 0 0
4RX9 18 0 0 0 1 0 0 0 0 0 0 2 0
4YJP 13 0 0 0 21 0 0 0 0 9 0 4 0
4FZ6 14 0 0 0 3 0 2 0 0 0 3 3 0
4PUZ 15 0 0 0 15 0 9 0 0 6 0 0 0
3EMG 4 0 0 0 14 0 9 0 0 3 0 10 0
4XG7 17 2 5 0 17 0 5 0 0 0 0 10 0
4RX7 18 0 0 3 0 13 2 0 0 0 0 3 0
4F4P 0 0 0 4 16 0 11 0 0 0 0 2 0
4DFL 12 0 0 3 10 0 16 0 0 0 0 3 0
4RSS 16 0 0 0 16 8 6 0 0 0 0 9 0
4XG2 21 0 0 9 15 0 6 0 0 0 0 7 0
3VF9 11 0 0 0 12 0 13 0 0 0 0 2 0
4YJT 11 0 0 0 17 0 0 0 0 5 0 0 0
4I0R 9 0 0 2 16 3 14 0 0 7 3 2 0
3SRV 19 0 0 0 16 0 13 0 0 6 0 6 0
5CXH 5 0 2 4 6 0 8 0 0 0 0 11 0
4RX8 16 0 0 0 7 0 7 0 0 0 0 2 0
3FQE 12 0 0 9 13 0 0 0 0 0 0 2 0
5C27 15 0 0 0 9 0 8 0 0 0 0 5 0
4I0S 4 0 0 0 17 0 12 0 0 9 0 9 0
4YJQ 9 0 0 3 21 0 0 0 0 0 0 0 0
4GFG 12 0 11 3 16 0 0 0 0 0 3 4 0
5GHV 13 0 0 0 8 4 15 0 0 3 0 4 0
3TUC 4 0 0 0 11 0 0 0 0 0 0 4 0
4I0T 12 0 0 0 15 0 2 0 0 11 0 6 0
3TUB 7 0 0 0 6 0 17 0 0 0 0 3 0
4XG8 0 0 0 6 16 0 8 0 0 0 0 5 0
5CY3 2 0 0 3 12 0 8 0 0 0 0 14 0
5CXZ 22 0 0 5 2 13 5 0 0 0 0 6 0
4XG4 10 0 0 2 8 8 16 0 0 6 0 5 0
3FQS 2 0 0 2 15 0 7 0 0 0 0 2 0
1XBC 15 0 0 6 14 0 10 0 0 5 0 3 0
4FYO 5 0 10 0 11 0 5 0 0 12 0 4 0
AFP43405 0 0 0 0 0 0 11 0 0 0 0 0 0
4FL3 20 0 18 0 14 0 0 0 0 11 0 8 0
1XBA 17 0 0 2 17 0 10 0 0 0 0 5 0
4XG3 0 0 4 0 8 0 15 0 0 2 0 5 0
4YJV 11 0 0 5 17 12 0 0 0 0 0 0 0
3FQH 20 0 2 0 15 11 7 0 0 0 0 15 0
4FZ7 6 0 0 0 16 0 11 9 0 0 0 3 0
4YJR 8 0 0 3 13 0 0 0 0 0 0 0 0
5C26 15 0 0 3 0 0 9 0 0 0 0 5 0
3VF8 17 0 0 0 16 0 12 0 0 0 0 3 0